naivebayes

The naivebayes package presents an efficient implementation of the widely-used Naive Bayes classifier. It upholds three core principles: efficiency, user-friendliness, and reliance solely on Base R. By adhering to the latter principle, the package ensures stability and reliability without introducing external dependencies. This design choice maintains efficiency by leveraging the optimized routines inherent in Base R, many of which are programmed in high-performance languages like C/C++ or FORTRAN. By following these principles, the naivebayes package provides a reliable and efficient tool for Naive Bayes classification tasks, ensuring that users can perform their analyses effectively and with ease, even in the presence of missing data.

Details

The general naive_bayes() function is designed to determine the class of each feature in a dataset, and depending on user specifications, it can assume various distributions for each feature. It currently supports the following class conditional distributions:

• Categorical distribution for discrete features (with Bernoulli distribution as a special case for binary outcomes)

• Poisson distribution for non-negative integer features

• Gaussian distribution for continuous features

• non-parametrically estimated densities via Kernel Density Estimation for continuous features

In addition to the general Naive Bayes function, the package provides specialized functions for various types of Naive Bayes classifiers. The specialized functions are carefully optimized for efficiency, utilizing linear algebra operations to excel when handling dense matrices. Additionally, they can also exploit sparsity of matrices for enhanced performance:

• Bernoulli Naiive Bayes via bernoulli_naive_bayes()

• Multinomial Naive Bayes via multinomial_naive_bayes()

• Poisson Naive Bayes via poisson_naive_bayes()

• Gaussian Naive Bayes via gaussian_naive_bayes()

• Non-Parametric Naive Bayes via nonparametric_naive_bayes()

These specialized classifiers are tailored to different assumptions about the underlying data distributions, offering users versatile tools for classification tasks. Moreover, the package incorporates various helper functions aimed at enhancing the user experience. Notably, the model fitting functions provided by the package can effectively handle missing data, ensuring that users can utilize the classifiers even in the presence of incomplete information.

Extended documentation can be found on the website:

• https://majkamichal.github.io/naivebayes/

Bug reports:

• https://github.com/majkamichal/naivebayes/issues

Contact:

• michalmajka@hotmail.com